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05.10.2017

2017

 

Komasilovs V., Pentjuss A., Elsts A., Stalidzans E. (2017) Total enzyme activity constraint and homeostatic constraint impact on the optimization potential of a kinetic model. Biosystems https://doi.org/10.1016/j.biosystems.2017.09.016 (CSML)

Rapoport, A. Anhydrobiosis and dehydration of yeasts (Review).- In: Biotechnology 
of Yeasts and Filamentous Fungi (Ed. A.Sibirny). Springer International Publishing, 2017, 87-116 (DOI: 10.1007/978-3-319-58829-2_4). (
LCB)

Matjuskova N., L.Okmane, D.Zala, L.Rozenfelde, M.Puke, I.Kruma, N.Vedernikovs, 
A.Rapoport. Effect of lignin-containing media on growth of medicinal mushroom Lentinula edodes. Proceedings of the Latvian Academy of Sciences. Section B, 2017, 71(1-2), 38-42 (DOI: 10.1515/prolas-2017-0007). (
LCB)

Rozenfelde L., M.Puke , I.Kruma , I.Poppele, N.Matjuskova, N.Vedernikovs , 
A.Rapoport. Enzymatic hydrolysis of lignocellulose for bioethanol production.- Proceedings of the Latvian Academy of Sciences. Section B, 2017, 71(4), 275-279 (DOI: 10.1515/prolas-2017-0046). (
LCB)

Leonova E., Shvirksts K., Grube M., Ignatovich L, Yu-Chian Chen C., Sjakste T., Sjakste N. (2017) Spectrophotometric study of DNA interactions with ftorafur and its elementoorganic derivatives, Journal of Toxicology and Environmental Chemistry, 99(4), 601-612 (Grube)

Muter O., Perkons I., Selga T., Berzins A., Gudra D., Radovica-Spalvina I., Fridmanis D., Bartkevics V. 2017. Removal of pharmaceuticals from municipal wastewaters at laboratory scaly by treatment with activated sludge and biostimulation. Science of the Total Environment 584-585:402-413. DOI:10.1016/j.scitotenv.2017.01.023 (LEM)

Kalneniece K., Berzins A., Petrina Z., Rugele K., Salava E., Svirksts K., Grube M., Nikolajeva V., Mutere O. Application of anaerobic digestate as inoculum for treatment of the plant-derived wastes: case study. Scientific Journal of RTU: Materials Sciences and Applied Chemistry, 33: 11-16. DOI: 10.1515/msac-2017-0008 (LEM)

Davids M., Gudra D., Radovica-Spalvina I., Fridmanis D., Bartkevics V., Muter O. 2017. The effects of ibuprofen on activated sludge: shift in bacterial community structure and resistance to ciprofloxacin, Journal of Hazardous Materials, Vol. 340, p. 291-299. (LEM)

Semjonovs P., Sakirova L., Broks R., Kistkins S., Zikmanis P. (2017) Influence of Environmental Factors on Extracellular Fructan and Oligosaccharide Production by Gluconobacter nephelii. Res J Microbiol; 12(1):33-41 DOI: 10.3923/jm.2017.33.41 (LIMFB)

Semjonovs P., Ruklisha M., Paegle L., Saka M.,Treimane R., Skute M., Rozenberga L., Vikele L., Sabovics M., Cleenwerck I. (2017) Cellulose synthesis by Komagataeibacter rhaeticus strain P 1463 isolated from Kombucha. Appl Microbiol Biotechnol; 101(3):1003-1012 DOI: 10.1007/s00253-016-7761-8 (LIMFB)

Rozenberga L., Skute M., Belkova L., Sable I., Vikele L., Semjonovs P., Saka M., Ruklisha M., Paegle L. (2016) Characterization of films and nanopaper obtained from cellulose synthesized by acetic acid bacteria. Carbohyd Polym; 144:33-40 DOI: 10.1016/j.carbpol.2016.02.025 (LIMFB)

Elsts, A., Pentjuss, A., Stalidzans, E. (2017) SpaceScanner: COPASI wrapper for automated management of global stochastic optimization experiments. Bioinformatics Vol. 33, p.2966-2967. (CSML)

Stalidzans, E., Mozga, I., Sulins, J., Zikmanis, P., (2017). Search for a Minimal Set of Parameters by Assessing the Total Optimization Potential for a Dynamic Model of a Biochemical Network. IEEE/ACM Trans. Comput. Biol. Bioinforma. 14, 978–985. (CSML) (LIMFB)

Pentjuss, A., Stalidzans, E., Liepins, J., Kokina, A., Martynova, J., Zikmanis, P., Mozga, I., Scherbaka, R., Hartman, H., Poolman, M.G., Fell, D.A., Vigants, A., (2017). Model-based biotechnological potential analysis of Kluyveromyces marxianus central metabolism. J. Ind. Microbiol. Biotechnol. Vol. 44, p. 1177–1190. (CSML) (LBC) (YNPL) (LIMFB)

2016

Martynova J., Kokina A, Liepins J, Scerbaka R, Vigants A, 2016. Effects of acetate on Kluyveromyces marxianus DSM 5422 growth and metabolism. Appl. Microb. and Biotechn., 100 (10), 4585-94 [0] (YNPL) (LBC)

Rutkis R, Strazdina I, Balodite E, Lasa Z, Galinina N, Kalnenieks U (2016) The Low Energy- Coupling Respiration in Zymomonas mobilis Accelerates Flux in the Entner-Doudoroff Pathway. PLoS ONE 11(4): e0153866. doi:10.1371/journal. pone.0153866 (LMB)

Reinholds I., Muter O., Pugajeva I., Rusko J., Perkons I., Bartkevics V. 2016. Determination of pharmaceutical residues and assessment of their removal efficiency at the Daugavgriva municipal wastewater treatment plant in Riga, Latvia. Available Online: 2016 Nov, wst2016528; DOI: 10.2166/wst.2016.528 (LEM)

Cvijovic, M., Höfer, T., Aćimović, J., Alberghina, L., Almaas, E., Besozzi, D., Blomberg, A., Bretschneider, T., Cascante, M., Collin, O., de Atauri, P., Depner, C., Dickinson, R., Dobrzynski, M., Fleck, C., Garcia-Ojalvo, J., Gonze, D., Hahn, J., Hess, H., Hollmann, S., Krantz, M., Kummer, U., Lundh, T., Martial, G., dos Santos, V.M., Mauer-Oberthür, A., Regierer, B., Skene, B., Stalidzans, E., Stelling, J., Teusink, B., Workman, C.T., Hohmann, S. (2016) Strategies for structuring interdisciplinary education in Systems Biology: an European perspective. npj Systems Biology and Applications, Vol.2, 16011. (CSML)

Semjonovs P., Patetko A., Grube M., Shvirksts K., Auzina L., Upite D., Linde R., Bormanis A., Upitis A., Ruklisa M., Kozlinskis E., Parele E.B., Gailitis J., Silina L., Denina I., Marauska M., Dlohi R. (2016) Application of Bifidobacterium lactis as the Single Strain Probiotic Starter Culture for Fermentation of Salmon (Salmo salar) Mince. Curr Nutr Food Sci, 12:28-34 (LIMFB)

Dokukins E., Muter O. 2016. Comparison of paraffin and diesel oil as cultivation medium supplements for preparing a hydrocarbon degrading bacterial biomass. Scientific Journal of RTU: Materials Sciences and Applied Chemistry, 33: 17-21. doi:10.1515/msac-2016-0003 (LEM)

Stankevica K., Vincevica-Gaile Z., Muter O., Klavins M. Physiological response of bacteria consortium to the presence of intact and autoclaved freshwater sapropel (gyttja) derived in the eastern Latvia. In: Microbes in the spotlight: recent progress in the understanding of beneficial and harmful microorganisms", Ed by A. Mendez-Vilas,  BrownWalker Press, 2016, pp.111-115.  http://www.formatex.info/biomicroworld2015/files/BMW2015-Cover.pdf (LEM)

Borovikova D., R.Teparic, V.Mrsa, A.Rapoport. Anhydrobiosis in yeast: cell wall mannoproteins are important for yeast Saccharomyces cerevisiae resistance to dehydration.- Yeast, 2016, 33, 8, 347-353 DOI: 10.1002/yea.3164 (LCB)

Rapoport A., B.Turchetti, P.Buzzini. Application of anhydrobiosis and dehydration of yeasts for non-conventional biotechnological goals (Review).- World J. Microbiol. Biotechnol., 2016, 32(6):104 (DOI: 10.1007/s11274-016-2058-8) (LCB)

Muter O., Berzins A., Selga T., Svinka R., Svinka V. 2016. Floating ceramics vs. floating oils: search for appropriate conditions. Scientific Journal of RTU: Materials Sciences and Applied Chemistry, 33: 11-16. doi:10.1515/msac-2016-0002 (LEM)

Rozenberga L., Skute M., Belkova L., Sable I., Vikele L., Semjonovs P., Saka M., Ruklisha M., Paegle L. (2016) Characterization of films and nanopaper obtained from cellulose synthesized by acetic acid bacteria. Carbohyd Polym; 144:33-40 (LIMFB)

Leonova E., Shvirksts K., Grube M. , Ignatovich L, Yu-Chian Chen C.,  Sjakste T., Sjakste N. (2016) Spectrophotometric study of DNA interactions with ftorafur and its elementoorganic derivative,  Journal of Toxicology and Environmental Health, Part A, (CSML) (Grube)

Grube M., Shvirksts K., Denina I., Ruklisa M., Semjonovs P. (2016) Fourier-transform infrared spectroscopic analyses of cellulose from different bacterial cultivaions usinsg microspectroscopy and a high-throughput screening device, Vibrational Spectroscopy, 84, 53-57,  http://dx.doi.org/10.1016/j.vibspec.2016.03.001 (LIMFB) (CSML) (Grube)

Semjonovs P., Sakirova L., Broks R., Patetko A., Kistkins S., Zikmanis P. (2016)  Optimization of cultivation conditions for extracellular fructan and oligosaccharide production by Gluconobacter nephelii. (LIMFB)

2015

 

Muter O., Dāvids M., Vecstaudža D., Šteinberga V., Kukela A., Segliņš V., Kļaviņš M. 2015. Waterless cleaning compositions with disinfection properties: efficacy and environmental aspects. Proceedings of the Latvian Academy of Sciences Section B Natural Exact and Applied Sciences 2015; 69(6):20-30. (LEM)

Vihodceva S., Kukle S., Muter O. 2015. Antimicrobial Properties of the Modified Cotton Textiles by the Sol-Gel Technology. Advanced Materials Research, 1117, 213-216. (LEM)

Berzins A., Petrina Z., Nikolajeva V., Svinka R., Svinka V., Strikauska S., Muter O. 2015. Characteristics of a Ceramic Carrier after Wastewater Treatment Process in the Model Column Cascade with Ethanol Addition. The Open Biotechnology Journal 9, (Suppl 1-M8), 76-84. DOI: 10.2174/1874070701509010076, benthamopen.com/ABSTRACT/TOBIOTJ-9-76 (LEM)

Liepins J, Kovačova E, Shvirksts K, Grube M, Rapoport A, Kogan G. 2015. Drying enhances immunoactivity of spent brewer's yeast cell wall β-D-glucans. J. Biotechnol. 206: 12-6.  [2] (LCB) (YNPL)

Rungis, D.E., Voronova, A., Kokina, A., Veinberga, I., Skrabule, I. and Rostoks, N. 2015. Assessment of genetic diversity and relatedness in the Latvian potato genetic resources collection by DArT genotyping. Plant Genetic Resources, pp.1-7. (YNPL)

Meitalovs J., Stalidzans E. (2015) Impact of Thermodynamic Constraint to the Solution Space of Metabolic Pathway Design Using sAnalyzer Tool. Baltic Journal of Modern Computing 3(3), pp.164-178 (CSML)

Duskova M., D.Borovikova, P.Herynkova, A.Rapoport, H.Sychrova. The role of glycerol transporters in yeast cells in various physiological and stress conditions.- FEMS Microbiol. Lett., 2015, vol. 362, 3, 1-8 (DOI: http://dx.doi.org/10.1093/femsle/fnu041) (LCB)

Borovikova D., I.Muiznieks, A.Rapoport. New test-system based on the evaluation of yeast cells resistance to dehydration-rehydration stress. - The Open Biotechnology Journal, 2015, 9, 49-53 (DOI: 10.2174/1874070701509010049) (LCB)

Muter O., Limane B., Strikauska S., Klavins M. 2015. Effect of humic-rich peat extract on plant growth and microbial activity in contaminated soil. Scientific Journal of RTU: Materials Sciences and Applied Chemistry, 32: 68-74. doi: 10.1515/msac-2015-0012 (LEM)

Vecstaudza D., Rutkis R., Klavins M., Muter O. 2015. Toxicity evaluation of surface cleaning preparation using different test methods. Scientific Journal of RTU: Materials Sciences and Applied Chemistry, 32: 80-84. doi: 10.1515/msac-2015-0014 (LEM)

Strikauska S., Berzins A., Arbidans L., Kukela A., Muter O., Klavins M. 2015. Physicochemical pre-treatment of contaminated microfibre cloths after their use in waterless car wash. Scientific Journal of RTU: Materials Sciences and Applied Chemistry, 32: 85-89. doi: 10.1515/msac-2015-0015 (LEM)

Stankevica K., Vincevica-Gaile Z., Muter O. 2015. Microbial community analysis of sapropel (gyttja) derived from small overgrowing lakes in the eastern Latvia. In: Soil ecosystem health and management of contaminated sites, Ed. by J.Truu and U.Kalnenieks, Proceedings of Congress of Baltic Microbiologists 2014, ISBN 978-9949-32-931-1 (pdf), University of Tartu Press, pp. 64-80. (LEM)

Semjonovs P., Shakirova L., Treimane R., Shvirksts K., Auzina L., Cleenwerck I., Zikmanis P. (2015) Production of extracellular fructans by Gluconobacter nephelii P1464. Lett Appl Microbiol; 62:145-152 (LIMFB)

Semjonovs P., Auzina L., Upite D., Grube M., Shvirksts K., Linde R., Denina I., Bormanis A., Upitis A., Ruklisha M., Parele E.B., Gailitis J., Silina L., Kozlinskis E., Marauska M., Danilevich A., Dlohi R. (2015) Application of Bifidobacterium animalis subsp. lactis as Starter Culture for Fermentation of Baltic Herring (Clupea harengus membras) Mince. Am J Food Technol; 10(5):184-194 (LIMFB)

Muter O., Kasparinskis R., Grantina-Ievina L., Sevcuka A., Afanasjeva K., Nikodemus O. 2015. Characterization of the changes in physicochemical and microbiological properties of sandy soil under single Picea abies L. trees on former agricultural lands. In: Soil ecosystem health and management of contaminated sites, Ed. by J.Truu and U.Kalnenieks, Proceedings of Congress of Baltic Microbiologists 2014, ISBN 978-9949-32-931-1 (pdf), University of Tartu Press, pp. 22-45. (LEM)

Muter O., Galinina N., Kalnenieks U. 2015. Monitoring of biomass growth in turbid media: optical density versus ATP concentration for oil degrading bacteria. In: Soil ecosystem health and management of contaminated sites, Ed. by J.Truu and U.Kalnenieks, Proceedings of Congress of Baltic Microbiologists 2014, ISBN 978-9949-32-931-1 (pdf), University of Tartu Press, pp. 9-21. (LEM)

Grube M., Shvirksts K., Davids M., Selga T., Kalnenieks U., Muter O. 2015. The response of hydrocarbons degrading bacteria consortium to zinc, copper and lead in batch culture. In: Soil ecosystem health and management of contaminated sites, Ed. by J.Truu and U.Kalnenieks, Proceedings of Congress of Baltic Microbiologists 2014, ISBN 978-9949-32-931-1 (pdf), University of Tartu Press, pp. 46-63. (LEM)

2014

 

Rutkis R., N. Galinina, I. Strazdina, and U. Kalnenieks (2014) The inefficient aerobic energetics of Zymomonas mobilis: Identifying the bottleneck. Journal of Basic Microbiology 54: 1-8. (LMB)

Buraka E., Yu-Chian Chen C., Bisenieks I., Nikolajeva V., Gavare M., Grube M., Bruvere I., Bisenieks E., Duburs G., Sjakste N. (2014) DNA-binding studies of AV-153, an antimutagenic and DNA repair-stimulating derivative of 1,4-dihydropiridine, Chem. Biol. Interact., 220C, 200-207., DOI: 10.1016/j.cbi.2014.06.027 (CSML) (Grube)

Muter O., Lebedeva G., Telysheva G. Evaluation of the changes made by gasification-1 biochar in a peat-sand substrate. International Agrophysics, 2014, 28: 471-478. doi: 10.2478/intag-2014-0037 (LEM)

Muter O., Berzins A., Strikauska S., Pugajeva I., Bartkevics V., Truu J., Truu M., Steiner C. (2014) The effects of woodchip- and straw-derived biochars on the persistence of the herbicide 4-chloro-2-methylphenoxyacetic acid (MCPA) in soils. Ecotoxicology and Environmental Safety 109, 93-100. DOI: 10.1016/j.ecoenv.2014.08.012 (LEM)

Muter O., Berzins A., Pogulis A., Grube M., Gavare M., Berzins A., Strikauska S., Hansons U., Hansons A. (2014) Evaluation of potato pulp as a composting substrate. Zemdirbyste-Agriculture, 101(1), DOI 10.13080/z-a.2014.101.008 (LEM)

Rundans M., Sperberga I., Sedmale G., Vecstaudza D., Muter O. Influence of bacteria Pseudomonas fluorescens on the properties of Latvian clay. Key Engineering Materials (Trans Tech Publications, Switzerland, Vol. 604, 208-211. doi: 10.4028/www.scientific.net/KEM.604.208 (LEM)

Kalnina I., Kirilova E., Gorbenko G., Kirilov G., Zvagule T., Linde R., Reste J. (2014) Long term alterations of blood plasma albumin of the blood plasma in Chernobyl clean-up workers. J Exp Integr Med; 4(3):165-170 (LIMFB)

Semjonovs P., Shakirova L., Denina I., Kozlinskis E. (2014) Development of a fructan-supplemented synbiotic cabbage juice beverage fermented by Bifidobacterium lactis Bb12. Res J Microbiol; 9(3):129-141 (LIMFB)

Semjonovs P., Denina I., Fomina A., Patetko A., Auzina L., Upite D., Upitis A., Danilevics A. (2014) Development of birch (Betula pendula Roth.) sap based probiotic fermented  beverage. Int Food Res J; 21(5): 1763-1767 (LIMFB)

Semjonovs P., Denina I., Linde R. (2014) Evaluation of physiological effects of acetic acid bacteria and yeast fermented non-alcohocolic beverage consumption in rat model. J Med Sci; 14(3):147-152 (LIMFB)

Vina I., Semjonovs P., Linde R., Denina I. (2014) Current evidence on physiological activity of kombucha fermented beverage and expected health effects. J Med Food; 17(2):179-188 (LIMFB)

Zikmanis P., Kampenusa, I. (2014) Relationship between metabolic fluxes and sequence-derived properties of enzymes. International Scholarly Research Notices. Vol.2014 (2014), article ID: 817102, 9 p. (LIMFB)

Muter O, Mihailova A, Berzins A, Shvirksts K, Patmalnieks A, Strikauska S., Grube M. (2014) Optimization of nitrification process by a bacterial consortium in the submerged biofiltration system with ceramic bead carrier. J Microb Biochem Technol 6: 148-153. doi: 10.4172/1948-5948.1000136 (LEM)

Muter O. Assessment of bioremediation strategies for explosives-contaminated sites. In: Biological remediation of explosive residues. S. N. Singh (ed.), Biological Remediation of Explosive Residues, Environmental Science and Engineering, Springer International Publishing Switzerland, 2014, pp.113-148. DOI: 10.1007/978-3-319-01083-0_6 (LEM)

Grovere K., Muter O. Organisko un neorganisko nesēju salīdzinošā testēšana baktēriju konsorcija MDK.EKO-7 imobilizācijai (Comparative stury on the organic and inorganic carriers for immobilization of bacteria consortium MDK.EKO-7). Latvijas derīgie izrakteņi, jaunas tehnoloģijas, materiāli un produkti. Red. V. Segliņš. Rīga, RTU izdevniecība, 2014, 111-118. (LEM)

Kaļva S., Zelča V., Muter O. Augsnei pievienotās bioogles ietekme uz lapu redīsu (Raphanus sativus L.) un sierāboliņa (Trigonella foenum-graecum L.) augšanu. (Effect of biochar on the growth of radish and fenugreek) Latvijas derīgie izrakteņi, jaunas tehnoloģijas, materiāli un produkti. Red. V. Segliņš. Rīga, RTU izdevniecība, 2014, 119-126. (LEM)

Balodite E., I. Strazdina, N. Galinina, S. McLean, R. Rutkis, R. K. Poole, and U. Kalnenieks (2014) Structure of the Zymomonas mobilis respiratory chain: oxygen affinity of electron transport and the role of cytochrome c peroxidase. Microbiology 160: 2045-2052. (LMB)

Kuka J, Liepinsh E, Makrecka-Kuka M, Liepins J, Cirule H, Gustina D, Loza E, Zharkova-Malkova O, Grinberga S, Pugovics O, Dambrova M, 2014. Suppression of intestinal microbiota-dependent production of pro-atherogenic trimethylamine N-oxide by shifting L-carnitine microbial degradation. Life. Sci. 117(2): 84-92 [12] (YNPL)

Kokina A, Kibilds J, Liepins J, 2014. Adenine auxotrophy – be aware. Some effects of adenine auxotrophy in Saccharomyces cerevisiae strain W303-1A, FEMS Yeast Res., 14(5): 697-707 [3] (YNPL)

Makrecka M, Svalbe B, Volska K, Sevostjanovs E, Liepins J, Grinberga S, Pugovics O, Liepinsh E, Dambrova M, 2014. Mildronate, the inhibitor of L-carnitine transport, induces brain mitochondrial uncoupling and protects against anoxia-reoxygenation, Eur. J. Pharmacol., 723: 55-61 [6] (YNPL)

Kalnenieks, U., Pentjuss, A., Rutkis, R., Stalidzans, E., & Fell, D. A. (2014). Modeling of Zymomonas mobilis central metabolism for novel metabolic engineering strategies. Frontiers in Microbiology, 5, 42. doi:10.3389/fmicb.2014.00042 (CSML) (LMB)

Mozga I., Stalidzans E (2014) Reduction of Combinatorial Space of Adjustable Kinetic Parameters of Biochemical Network Models in Optimisation Task. Baltic Journal of Modern Computing, 2(3), pp.150-159. (CSML)

Rapoport A., H.Heipieper. Biotechnological and environmental microbiological research in the Baltic region – Biotechnology and Applied Biochemistry, 2014, 61, No. 1, pp.1-2  (doi: 10.1002/bab.1210). (LCB)

Borovikova D., R.Scherbaka, A.Patmalnieks, A.Rapoport. Effects of yeast immobilisation on bioethanol production. – Biotechnology and Applied Biochemistry, 2014, 61, No. 1, pp.33-39  (doi: 10.1002/bab.1158). (LCB)

Borovikova D., P.Herynkova, A.Rapoport, H.Sychrova. Potassium uptake system Trk2 is crucial for yeast cell viability during anhydrobiosis.- FEMS Microbiol. Lett., 2014, vol. 350, No. 1, pp.28-33 (doi: 10.1111/1574-6968.12344). (LCB)

Rapoport A., N.Vedernikov, I.Kruma, M.Puke, D.Borovikova, L.Rozenfelde, G.Khroustalyova, N.Matyuskova. Waste-less bioethanol and other valuable substances production from hardwood.- WIT Transactions on Engineering Sciences, 2014, vol. 88, pp. 311-317. (LCB)

Rozenfelde L., A.Rapoport. Anhydrobiosis in yeast: is it possible to reach anhydrobiosis for yeast grown in conditions with severe oxygen limitation?- Antonie van Leeuwenhoek Journal of Microbiology, 2014, 106, 2, 211-217 (doi: 10.1007/s10482-014-0182-8) (LCB)

Borovikova D., L.Rozenfelde, I.Pavlovska, A.Rapoport. Immobilisation increases yeast cells resistance to dehydration-rehydration treatment.- J. Biotechnology, 2014, vol. 184, pp. 169-171 (doi: 10.1016/j.jbiotec.2014.05.017) (LCB)

Grube M., M.Gavare, L.Rozenfelde, A.Rapoport. Anhydrobiosis in yeast: FT-IR spectroscopic studies of yeast grown under conditions of severe oxygen limitation.--Biotechnology and Applied Biochemistry, 2014, 61, No. 4, pp. 474-479 (doi: 10.1002/bab.1165) (LCB)

Rapoport A., A.Rusakova, G.Khroustalyova, G.Walker (UK, Scotland). Thermotolerance  in Saccharomyces cerevisiae is  linked to resistance to anhydrobiosis.- Process Biochemistry, 2014, vol. 49, 1889-1892 (doi:10.1016/j.procbio.2014.07.006) (LCB)

Dupont S., A.Rapoport, P.Gervais, L.Beney. The survival kit of Saccharomyces cerevisiae for anhydrobiosis (Review).- Applied Microbiology and Biotechnology, 2014, 98, 21, 8821-8834 (doi 10.1007/s00253-014-6028-5) (LCB)

2013

 

Grube M, Dimanta I, Gavare M, Strazdina I, Liepins J, Juhna T, Kalnenieks U, 2013. Hydrogen-producing Escherichia coli strains, overexpressing lactose permease: FT-IR analysis of the lactose-induced stress, Biotechnol. Appl. Biochem., 61(2): 111-7 [1] (YNPL)

Pentjuss A., I. Odzina, A. Kostromins, D. A. Fell, E. Stalidzans and U. Kalnenieks (2013) Biotechnological potential of respiring Zymomonas mobilis: A stoichiometric analysis of its central metabolism. Journal of Biotechnology 165: 1-10. (LMB) (CSML)

Buraka E., Yu-Chian Chen C., Bisenieks I., Nikolajeva V., Gavare M., Grube M., Bruvere I., Bisenieks E., Duburs G., Sjakste N. (2014) DNA-binding studies of AV-153, an antimutagenic and DNA repair-stimulating derivative of 1,4-dihydropiridine, Chem. Biol. Interact., 220C, 200-207., DOI: 10.1016/j.cbi.2014.06.027 (CSML) (Grube)

Vigants A., D Upite, R Scherbaka, J Lukjanenko, R Ionina (2013) An influence of ethanol and temperature on products formation by different preparations of Zymomonas mobilis extracellular levansucrase. FOLIA MICROBIOLOGICA 58: 75-80 (LBC)

Nehrenheim E., Muter O., Odlare M., Rodriguez A., Cepurnieks G., Bartkevics V. Toxicity assessment and biodegradation potential of water soluble sludge containing 2,4,6-trinitrotoluene. Water Science & Technology, 01/2013, 68(8):1707-14. (LEM)

Mutere O., Nikolajeva V. Latvijas mālu pielietošana biotehnoloģijā: rezultāti un perspektīvas. Scientific Journal of RTU: Materials Sciences and Applied Chemistry 2013 (29): 148-151. (LEM)

Sedmale G., Korovkins A., Mutere O., Šperberga I., Rundāns M. Dažādi apstrādātu illītu mālu struktūras izmaiņas un to ietekme uz keramikas materiāla īpašībām. Scientific Journal of RTU: Materials Sciences and Applied Chemistry 2013 (29):51-55. (LEM)

Muter O., Rapoport A. Some physiological aspects of chromium sorption by yeasts. ISBN 978-3-659-41428-2. LAP LAMBERT Academic Publishing, 2013, 113p. (LEM) (LCB)

Nõlvak H., Truu J., Truu M., Juhanson J., Cepurnieks G., Bartkevics V., Limane B., Muter O. 2013. Microbial community changes in TNT spiked soil bioremediation trial using biostimulation, phytoremediation and bioaugmentation. Journal of Environmental Engineering and Landscape Management, 21(3), 153-162. (LEM)

Rutkis R., U. Kalnenieks, E. Stalidzans, and D. A. Fell (2013) Kinetic modeling of Zymomonas mobilis Entner-Doudoroff pathway: insights into control and functionality. Microbiology 159: 2674-2689. (LMB) (CSML)

Rubina T., Stalidzans E. (2013) BINESA – a software tool for evolution modelling of biochemical networks structure. In Proceedings of IEEE 14th International Symposium on Computational Intelligence and Informatics (CINTI), November 19-20, Budapest, Hungarypp.345-350. doi:10.1109/CINTI.2013.6705218 (CSML)

Pentjuss, A., & Kalnenieks, U. (2013). Assessment of Zymomonas mobilis biotechnological potential in ethanol production by flux variability analysis. Biosystems and Information Technology, 3(1), 1–5. doi:10.11592/bit.140502    (CSML)

Semjonovs P., Denina I., Fomina A., Sakirova L., Auzina L., Patetko A., Upite D. (2013) Evaluation of Lactobacillus reuteri strains for pumpkin (Cucurbita pepo L.) juice fermentation. Biotechnol; 12(5):202-208 (LIMFB)

Denina I., Semjonovs P., Fomina A., Treimane R., Linde R. (2013) The influence of stevia glycosides on the growth of Lactobacillus reuteri strains. Lett Appl Microbiol; 58:278-284 (LIMFB)

Vīna I,. Semjonovs P., Linde R., Patetko A. (2013) Glucuronic acid containing fermented functional beverages produced by natural yeasts and bacteria associations. Int J Res Rev Appl Sci; 14(1):17-25 (LIMFB)

Vīna I., Linde R., Patetko A., Semjonovs P. (2013) Glucuronic acid from fermented beverages: biochemical functions in humans and its role health protection. Int J Res Rev Appl Sci; 14(2):217-230 (LIMFB)

Zikmanis P., Kampenusa, I. (2013) Relationship between metabolic fluxes and sequence-derived properties of enzymes. Central European Journal of Biology Vol.8, N 2 (2013), p.107-120. (LIMFB)

Shakirova, L., Grube, M., Gavare, Auzina, L., Zikmanis P. (2013) Relationship between the cell surface hydrophobicity and survival of probiotic bacteria Lactobacillus acidophilus La5 and Bifidobacterium lactis Bb12 and characteristics of FT-IR spectra Journal of Industrial Microbiology and Biotechnology. Vol.40, N 1 (2013), p.85-93 (LIMFB)

Rubina T., Mednis M., Stalidzans E. (2013) Agreement assessment of biochemical pathway models by structural analysis of their intersection. In Proceedings of IEEE 14th International Symposium on Computational Intelligence and Informatics (CINTI), November 19-20, Budapest, pp.411-418, doi:10.1109/CINTI.2013.6705232 (CSML)

Mednis, M., Vigants A., (2013) Automatic comparison of metabolites names: impact of criteria thresholds. Biosystems and Information technology, 2(1), pp 1-5, doi:10.11592/bit.130501 Full text    (CSML)

Meitalovs, J., & Stalidzans, E. (2013). Connectivity analysis of metabolites in synthetic metabolic pathways. In Proceedings of the 12th International Scientific Conference “Engineering for Rural Development” (pp. 435–440). Jelgava, Latvia. (CSML)

Rapoport A., G.Khroustalyova, L.Rozenfelde, D.Borovikova, E.Kolomiets. Anhydrobiosis in microorganisms and new biotechnological solutions. – In: Microbial Biotechnologies: Fundamental and Applied Issues. Minsk, Belaruskaya navuka, 2013, vol. 5, pp.141-154 (in Russian). (LCB)

2012

 

Smits K, Liepins J, Gavare M, Patmalnieks A, Gruduls A, Jankovica Dz, 2012. Zirconia nanocrystals as submicron level biological label, IOP Conf. Ser.: Mater. Sci. Eng. 38, 012050 [2] (YNPG)

Strazdina I., N. Kravale, N. Galinina, R. Rutkis, R.K. Poole, U. Kalnenieks (2012) Electron transport and oxidative stress in Zymomonas mobilis respiratory mutants. Archives of Microbiology 194: 461-471. (LMB)

Galinina N., Z. Lasa, I. Strazdina, R. Rutkis, U. Kalnenieks (2012) Effect of ADH  II-deficiency on the intracellular redox homeostasis in Zymomonas mobilis. The Scientific World Journal, Volume 2012, Article ID 742610, 6 pages (LMB)

Grube M., R. Rutkis, M. Gavare, Z. Lasa, I. Strazdina, N. Galinina and U. Kalnenieks (2012) Application of FT-IR spectroscopy for fingerprinting of Zymomonas mobilis respiratory mutants. Spectroscopy: An International Journal. 27(5-6): 581-585. (LMB) (LIMFB)

Semjonovs P. (2012) Bioloģiski aktīvās vielas pārtikas produktos: Pienskābes baktēriju producēto eksopolisaharīdu perspektīvas pārtikas produktu ražošanā (pp. 109-110); Pienskābes baktēriju eksopolisaharīdu izmantošana pārtikas produktu ražošanā (pp. 110-113). LLU Pārtikas tehnoloģijas fakultāte. (LIMFB)

Stalidzans E., Kostromins A., Sulins J., Two stage optimization of biochemical pathways using parallel runs of global stochastic optimization methods. "13th IEEE International Symposium on Computational Intelligence and Informatics", Budapest, Hungary, 20.-22. November 2012, pp 365-369.Full text available at:http://dx.doi.org/10.1109/CINTI.2012.6496792 (CSML)

Kostromins A., Mozga I., Stalidzans E. ConvAn: a convergence analyzing tool for optimization of biochemical networks, Biosystems, Volume 108, Issues 1–3, April–June 2012, pp 73-77, ISSN 0303-2647, 10.1016/j.biosystems.2011.12.004.Full text available at: http://dx.doi.org/10.1016/j.biosystems.2011.12.004 (CSML)

Kostromins A., Stalidzans E. Paint4Net: COBRA Toolbox extension for visualization of stoichiometric models of metabolism, Biosystems, Volume 109, Issue 2, August 2012, pp 233-239, ISSN 0303-2647, 10.1016/j.biosystems.2012.03.002.Full text available at: http://dx.doi.org/10.1016/j.biosystems.2012.03.002 (CSML) (Grube)

Sulins J., Stalidzans E. Corunner: multiple optimization run manager for Copasi software. In Proceedings of the International Scientific Conference "Applied Information and Communication Technologies", April 26.-27., 2012, Jelgava, Latvia, ISBN 978-9984-48-065-7, pp 312-316.Full text available at:http://aict.itf.llu.lv/files/rakstkraj/2012/sulins_aict2012.pdf (CSML)

Mednis, M., Brusbardis, V., Galvanauskas, V. Comparison of genome-scale reconstructions using ModeRator, Proceedings of 13th IEEE International Symposium on Computational Intelligence and Informatics, Budapest, 2012, pp 79-84 doi:10.1109/CINTI.2012.6496737  (CSML)

Mednis, M., Aurich, M.K., (2012) Application of string similarity ratio and edit distance in automatic metabolite reconciliation comparing reconstructions and models, Biosystems and Information technology, vol 1(1), pp 14-18 doi:10.11592/bit.121102 Full text  (CSML)

Rozenfelde L., G.Khroustalyova, M.Mandryk, E.Kolomiets, A.Rapoport. Physiological engineering of Pseudomonas aurantiaca antimicrobial activity: effects of NaCl treatments. Microbiology Research, 2012, 3, e28, pp. 108-111  (LCB)

Parfejevs V., Gavare M., Cappiello L., Grube M., Muceniece R., Riekstina U. (2012) Evaluation of biochemical changes in dermal stem cells during in vitro neurodifferentiation by FT-IR analysis, Spectroscopy: An International Journal, 27(5-6), 315-320. http://dx.doi.org/10.1155/2012/286542  (LIMFB) (CSML) (Grube)

Polakovs M., Mironova-Ulmane N., Pavlenko A., Reinholds E., Gavare M., Grube M. (2012) EPR and FT-IR spectroscopy studies of human blood after irradiation, Spectroscopy: An International Journal, 27(5-6), 367-371. (LIMFB) (CSML) (Grube)

Muter O., Potapova K., Limane B., Sproge K., Jakobsone I., Cepurnieks G., Bartkevics V. The role of nutrients in the biodegradation of 2,4,6-trinitrotoluene in liquid and soil. Journal of Environmental Management. 2012, 98:51-55. (LEM)

Muter, O., Potapova, K., Poršņovs, D., Kļaviņš, M. Biodegradation of oil sorbed on peat after its use as a spill cleanup sorbent. Scientific Journal of RTU: Materials Sciences and Applied Chemistry, 2012 (26): 120-126. (LEM)

Bērziņš, A., Potapova, K., Strikauska, S., Muter, O. Combination of straw and ceramic materials for biofiltration of volatile hydrocarbons. Scientific Journal of RTU: Materials Sciences and Applied Chemistry, 2012 (26): 127-133. (LEM)

Muter, O., Potapova, K., Nikolajeva, V., Petriņa, Z., Griba, T., Patmalnieks, A., Švinka, R., Švinka, V. Comparative study on bacteria colonization onto ceramic beads originated from two Devonian clay deposits in Latvia. Scientific Journal of RTU: Materials Sciences and Applied Chemistry, 2012 (26): 134-139. (LEM)

Šteinberga V., Mutere O., Jansone I., Alsina I., Dubova L. 2012. Effect of buckwheat and potato as the forecrop to soil properties in crop rotation. Proc. of the Latvian Academy of Sciences. Section B. Natural, Exact, and Applied Sciences, 66(4-5): 185-191. (LEM)

Jonina, R., Lukjanenko, J., Shulins J., Pentjuss A., Vigants A. (2012) Cofermentation of sucrose medium and fructans hydrolyzing enzymes by Zymomonas mobilis : experimental and modeling approach. 15th International Biotechnology Symposium and Exhibition (IBS 2012), Daegu, Republic of Korea, September 16-21, 2012 : [abstracts]. 2 p., abstract Nr.S8-0061 (LIMFB)

Zikmanis P., Kampenusa I. (2012) Relationships between kinetic constants and the amino acid composition of enzymes from the yeast Saccharomyces cerevisiae glycolysis pathway. EURASIP Journal on Bioinformatics and Systems Biology. N 2012 (2012), 9 p. (LIMFB)

2011

 

Mozga I., Stalidzans E. Convergence Dynamics of Biochemical Models To The Global Optimum, 3rd IEEE International Conference on e-Health and Bioengineering, EHB 2011 – Proceedings, pp. 227-230. Full text available at: ehb2011_mozga.pdf (CSML)

Mozga I., Stalidzans E. Optimization protocol of biochemical networks for effective collaboration between industry representatives, biologists and modellers, 9th International Industrial Simulation Conference (ISC'2011), Venice, Italy, 2011. pp. 91–96.Full text available at: isc2011_mozga_stalidzans.pdf (CSML)

Rapoport A., D.Borovikova, A.Kokina, A.Patmalnieks, N.Polyak, I.Pavlovska, G.Mezinskis, Yu.Dekhtyar. Immobilisation of yeast cells on the surface of hydroxyapatite ceramics.- Process Biochemistry, 2011, vol. 46, No. 3, p. 665-670  (doi: 10.1016/j.procbio.2010.11.009) (LCB) (YNPL)

Berzins A., Potapova K., Limane B., Strikauska S., Muter O. Interrelations between soil bacteria and rye Secale cereale L. in the presence of nitroaromatic compounds. Environmental Engineering, The 8th International Conference, May 19–20, 2011, Vilnius, Lithuania, Selected papers. Vilnius Gediminas Technical University, 2011, 25-30. (LEM)

Visnapuu T, Mardo K, Mosoarca C, Zamfir AD, Vigants A, Alamae T. (2011) Levansucrases from Pseudomonas syringae pv. tomato and P. chlororaphis subsp. aurantiaca: substrate specificity, polymerizing properties and usage of different acceptors for fructosylation.  J BIOTECHNOL. 155: 338-349 (LBC)

Limane B., Muter O., Juhanson J., Truu M., Truu J., Nolvak H. Characterization of microbial community structure after application of different bioremediation approaches in TNT contaminated soil. Environmental Engineering, The 8th International Conference, May 19–20, 2011, Vilnius, Lithuania, Selected papers. Vilnius Gediminas Technical University, 2011, 188-194. (LEM)

Odlare M., Nehrenheim E., Ribe V., Thorin E., Gavare M., Grube M. (2011) Cultivation of algae with indigenous species - potentials for regional biofuel production, Applied Energy, 88(10), 3280–3285 (LIMFB)

Tihomirova K., Gavare M., Mežule L., Grube M., Juhna T. (2011) Application of FT-IR for characterization of biomass isolated from drinking water with high concentration of natural organic matter. Environmental Enginnering 2 & 3, pp. 672-678 (LIMFB)

Muter O., Berzins A., Potapova K., Strikauska S., Stelmahere S. Bacteria immobilization on ceramic beads for soil remediation technolgies. J Sci Pub : Ecology & Safety (ISP:EB) ISSN: 1313-2563, 2011, Vol.5. 152-162. (LEM)

Ashihmina O., Dubova L., Potapova K., Muter O. Eco-toxicity of nitroaromatics: comparative study for different conditions. J Sci Pub: Ecology & Safety (ISP:EB) ISSN: 1313-2563, 2011, Vol.5. 97-109. (LEM)

Potapova K., Limane B., Gavare M., Grube M., Mutere O. Mikroorganismu izmantošana sprādzienbīstamo vielu degradācijā. Militārā zinātne. 2011. No.2, 92-102. In Latvian, available at: doc.mod.gov.lv/lv/militara_zinatne/2011/3/ (LEM)

Telysheva G., Jashina L., Lebedeva G., Dizhbite T., Solodovnik V., Mutere O., Grigiškis S., Baškys E., Aikaite J. Use of plants to remediate soil polluted with oil. Proc. of the 8th Int. Sci. and Practical Conf. Rēzeknes Augstskola, Rēzekne, RA Izdevniecība, 2011, Vol.1, 38-45. (LEM)

2010

 

Trofimova Yu., G.Walker, A.Rapoport. Anhydrobiosis in yeast: influence of calcium and magnesium ions on yeast resistance to dehydration-rehydration.- FEMS Microbiology Letters, 2010, vol. 308, No. 1, p. 55-61 (doi: 10.1111/j.1574-6968.2010.01989.x) (LCB)

Кolomiets E.I., A.I.Rapoport, A.V.Sviridov, O.S.Кilchevskaya, V.N.Кuptsov, T.V.Romanovskaya. Clamp rot pathogens activity of sugar beet and new methods of their control.- Advances in Agricultural Sciences (Warsaw), 2010, 554, 93-100. (LCB)

Muter O., Mihailova A., Vanags J., Strikauska S., Zarina D., Viesturs U. Development of submerged and solid state bioreactors for waste gas treatment.  Biotechniques for Air Pollution Control - Proceedings of the 3rd International Congress on Biotechniques for Air Pollution Control , 2010, pp. 345-347.  (LEM)

Muter O. Combination of Bioremediation Strategies as a Tool for Efficient Biodegradation of Explosives. SAFEX Newsletter No.32, 1st Qtr.2010, 13-15. (LEM)

Bekers M., Grube M., Upite D., Kaminska E., Linde R., Pelce E., Danilevich A., Gavare M., Karklina D. (2010) The Resistance of some probiotics bacteria in the Stomach Model Environment. Proceedings of the Latvia University of Agriculture Nr. 24 (319), Jelgava, pp. 55-64 (LIMFB)

Denina I., Paegle L, Prouza M, Holátko J, Pátek M, Nešvera J, Ruklisha M. (2010) Factors enhancing L-valine production by growth limited L-isoleucine auxotrophic strain Corynebacterium glutamicum DilvA DpanB ilvNM13 (pECKAilvBNC) J Ind Microbiol Biotechnol. 37, pp. 689-99 (LIMFB)

Shakirova L., Auzina L., Zikmanis P., Gavare M., Grube M. (2010) Influence of growth conditions on hydrophobi of Lactobacillus acidophilus and Bifidobacterium lactic cells and characteristics by FT-IR spectra. Spectroscopy. 24 (4), pp. 251-255 (LIMFB)

Brusbardis V, Liepins J, 2010. Mathematical modeling of glycerol cycle in baker’s yeast, Research for Rural Development, Annual 16th, International Scientific Conference Proceedings, Jelgava, LLU, 214 – 220, ISSN 1691-4031 [0] (YNPL)

2009

 

Rapoport A.I., G.M.Khroustalyova, L.M.Crowe, J.H.Crowe. Anhydrobiosis in yeast: stabilization by exogenous lactose.- Mikrobiologiya, 2009, vol. 78, No. 5, p. 690-694. (LCB)

Dubova L., Limane B., Muter O., Versilovskis A., Zarina D., Alsina I. Effect of nitroaromatic compounds to the growth of potted plants. In: “Current Research Topics in Applied Microbiology and Microbial Biotechnology", Ed.Antonio Mendez-Vilas World Scientific Publishing Co. 2009, 24-28. (LEM)

Limane B., Juhanson J., Truu J., Truu M., Muter O., Dubova L., Zarina D. Changes in microbial population affected by physico-chemical conditions of soils contaminated by explosives. In: “Current Research Topics in Applied Microbiology and Microbial Biotechnology", Ed.Antonio Mendez-Vilas World Scientific Publishing Co. 2009, 637-640.  (LEM)

Mironova-Ulmane N., Kuzmin A., Grube M. (2009) Raman and Infrared spectromicroscopy of manganese oxides, Journal of Alloys and Compounds, 480, 97-99 (LIMFB)

Rapoport A.I., G.M.Khroustalyova, L.M.Crowe, J.H.Crowe. Anhydrobiosis in yeast: stabilization by exogenous lactose.- Microbiology, 2009, vol. 78, No. 5, p. 624-629. (LCB)

Khroustalyova G., J.Boudrant, A.Rapoport. Resistance of a recombinant Escherichia coli to dehydration.- Cell Biology International, 2009, vol. 33, p. 1194-1195 (doi: 10.1016/j.cellbi.2009.07.001) (LCB)

Boudrant J., G.Khroustalyova, A.Rapoport. Obtention d’une résistance élevée d’une souche d’Escherichia coli recombinée vis-à-vis de la déshydratation.- Récents Progrès en Génie des Procédés, 2009, 98, 149-1 – 149-6. (LCB)

Dekhtyar Yu., L.Lancere, N.Polyaka, A.Rapoport, A.Rusakova, A.Sudnikovich, V.Valters. Ultraviolet radiation influences wettability and biological properties of PMMA surface.- Medical Physics in the Baltic States, 2009, 7, 69 - 7l. (LCB)

2008

 

Kalnenieks U., N. Galinina, I. Strazdina, Z. Kravale, J.L. Pickford, R. Rutkis, R.K. Poole (2008) NADH dehydrogenase deficiency results in low respiration rate and improved aerobic growth of Zymomonas mobilis. Microbiology 154: 989-994. (LMB)

Guzhova I., I.Krallish, G.Khroustalyova, B.Margulis, A.Rapoport. Dehydration of yeast: changes in the intracellular content of Hsp 70 family proteins.- Process Biochemistry, 2008, vol. 43, N 10, p. 1138-1141. (doi:10.1016/j.procbio.2008.05.012) (LCB)

Borovikova D., S.Cifansky, Y.Dekhtyar, V.Fedotova, V.Jakushevich, A.Katashev, A.Patmalnieks, A.Rapoport. Atomic Force Microscopy Study of Yeast Cells Influenced by High Voltage Electrical Discharge.- IFMBE Proceedings, 2008, vol. 20, p. 602-605. (LCB)

Bekers M., Upite D., Kaminska E., Linde R., Scherbaka R., Danilevich A., Grube M. (2008) Fermentation of Jerusalem artichoke by Zymomonas mobilis and Saccharomyces cerevisiae. Nutrition & Food Science, vol. 38, No 2, pp. 128-134 (LIMFB)

Bekers M., Grube M., Upite D., Kaminska E., Danilevich A., Viesturs U., Karklina D. (2008). Inulin Syrup from dried Jerusalem Artichoke. LLU Raksti, 21 (315), Jelgava, pp. 116-121 (LIMFB)

Bekers M.,Grube M , Upite D., Kaminska E., Linde R., Danilevich A., Viesturs U. (2008) Production of ethanol by Saccharomyces cerevisiae using semi-products of sugar beet processing. In: Renewable Energy Resources, Production and Technologies, “Zinatne”  Publishers, pp.78-86 (LIMFB)

Bekers M.,Upite D., Kaminska E., Danilevich A., Linde R., Grube M., Viesturs U. (2008) Production of bioethanol and fructans from the semi-products of sugar beet processing Zymomonas mobilis. In: Renewable Energy Resources, Production and Technologies, “Zinatne” Publishers, pp.72-77 (LIMFB)

Semjonovs P., Zikmanis P. (2008) Evaluation of novel lactose-positive and exopolysaccharide-producing strain of Pediococcus pentosaceus for fermented foods. Eur.Food Res.Technol. 227 (3), pp. 851-856 (LIMFB)

Shakirova L., Auzina L., Grube M., Zikmanis P. (2008) Relationship between the cell surface hydrophobicity and survival of bacteria Zymomonas mobilis after exposures to ethanol,freezing and freeze-drying. J. Industrial Microbiol.Biotechnol. 35(10), pp. 1175-1180 (LIMFB)

Vina I., Linde R., Danilevich A., Bekers M., Sprudza, D. (2008) Interfacing natural products: inulin of Jerusalem artichoke – affirmative biological effects. Drugs of the Future, vol. 33, Suppl. A, p. 119-120 (LIMFB)

Kokina, A. and Rostoks, N., 2008, January. Genome-Wide and Mla Locus-Specific Characterisation of Latvian Barley Varieties. In Proceedings of the Latvian Academy of Sciences. Section B. Natural, Exact, and Applied Sciences. (Vol. 62, No. 3, pp. 103-109). (YNPG)

Kokina, A., Legzdina, L., Berzina, I., Bleidere, M., Rashal, I., Rostoks, N. and Šterne, D., 2008. Molecular marker-based characterization of barley powdery mildew Mlo resistance locus in European varieties and breeding lines. Agronomijas Vēstis, (11), pp.77-83. (YNPL)

Muter O.; Versilovskis A., Scherbaka R., Grube M.; Zarina Dz. Effect of plant extract on the degradation of nitroaromatic compounds by soil microorganisms. J. Ind. Microbiol. Biotechol. 2008, 35: 1539-1543. (LEM)

Grube M.; Muter O., Strikauska S., Gavare M., Limane B. Application of FT-IR for control of the medium composition during biodegradation of nitro aromatic compounds. J. Ind. Microbiol. Biotechol. 2008, 35: 1545-1549. (LEM) (LIMFB)

Mihailova A., Muter O., Strikauska S., Limane B., Berzins U., Viesturs U., Zarina D. In: The 7th International Conference “Environmental Engineering”, Ed. D.Cygas, K.D.Froehner, Vilnius 22-23 May, 2008, p.218-223. (LEM)

Strikauska S., Muter O., Berzins A., Mihailova A., Sudars R., Zarina D., Viesturs U. Reduction of ammonia emission and it’s evaluation: the case of domestic animals. NOSE2008. 1st International Conference on Environmental Odour Monitoring and Control. Rome, Italy, 4-6 July, 2008. Proceedings. CD-Rom, www.aidic.it/nose2008/webpapers/22Strikauska.pdf  (LEM)

Dubova L., Muter O., Mihailova A., Alsina I., Steinberga V., Limane B., Zarina Dz. Growth of peas Pisum sativum L. in the presence of diesel and bacteria consortia in peat and sandy soil. 10th WSEAS International Conference on Mathematical methods, computational techniques, non-linerar systems, intelligent systems(MAMECTIS'08). Corfu, Greece, October 26 -28, 2008. Published by WSEAS Press, 403-407. (LEM)

Muter O., Strikauska S., Abols J., Zarina Dz., Viesturs U. Assessment of pesticides-contaminated soil: the case study from remediation viewpoint. Proceedings of the 2nd WSEAS/IASME Conf. on Waste Management, Water Pollution, Air Pollution and Indoor Climate (WWAI’08). Corfu, Greece, October 26-28, 2008, 127-131. (LEM)

Dizhbite T., Telysheva G., Bikovens O., Mutere O., Andersone A. Potentials of technical lignins for application as soil amendments: free radical scavengers and biological activity. In: Proc. Of the 14th Int. Meeting of the Int. Humic Substrates Society. Ed. By I.V. Perminova, N.A. Kulikova. Moscow-Saint Petersburg, September 14-19, 2008, 639-642. (LEM)

Limane B., Cugunov M., Muter O., Dubova L., Alsina I. The impact of petroleum hydrocarbons on the soil enzymatic activity and plant growth. In Proceedings of 17th International Symposium of CIEC Plant nutrient management under stress conditionsNational Reserch Centre (NRC) 24-27 Nov. Cairo- Egypt, 2008, pp. 239-245. (LEM)

2007

 

E.I.Kolomiets, A.I.Rapoport. Biological control of phytopathogens using Bacillus bacterium: current state and prospective.- In: Belarus – Latvia: Science. Innovation. Investments. Minsk, 2007, p. 77-79 (in Russian). (LCB)

Zariņa D., Dubova L., Mutere O., Viesturs U., Bērziņš A., Strikauska. The influence of climatic conditions on the sanitary state of composting and post composting processes. EcoBalt, Rīga May 10-11, 2007, 70-71. (LEM)

Strikauska S., Zariņa Dz., Mutere O., Viesturs U., Bērziņš A. Effect of various factors to ammonia biodegradation by two stage biofiltration system. In: Proc. Of the II Int. Congress on Biotechniques for Air Pollution Control, La Coruna, Spain, October 3-5, 2007, 293-302. (LEM)

2006 and older

 

Kalnenieks U.  (2006) Physiology of Zymomonas mobilis: some unanswered questions. Advances in Microbial Physiology 51: 73-117. (LMB)

Rapoport A.I., Anabiosis of microorganisms: from live nature towards modern biotechnologies. – In: Proceedings of the International Conference “Ecology of Microorganisms”. Moscow, Max Press, 2006, p. 59-62. (LCB)

Liepins J, Kuorelahti S, Penttilä M, Richard P, 2006. Enzymes for the NADPH-dependent reduction of dihydroxyacetone and D-glyceraldehyde and L-glyceraldehyde in the mould Hypocrea jecorina. FEBS J. 2006, 273(18): 4229-35. [23] (YNPL)

Zariņa Dz., Dubova L., Bērziņš A., Viesturs U., and Strikauska S. Effect of Inoculum on the Survival of Pathogenic Agents in Different Composts. In “Modern Multidisciplinary Applied Microbiology, Ed. by Antonio Mendez-Vilas, Wiley-VCH Verlag GmbH& Co.KGaA, 2006, p. 737–743. (LEM)

Kalnenieks U., N. Galinina, M.M. Toma, J.L. Pickford, R. Rutkis, R.K. Poole (2006) Respiratory behaviour of a Zymomonas mobilis adhB::kanr mutant supports the hypothesis of two alcohol dehydrogenase isoenzymes catalysing opposite reactions. FEBS Letters 580: 5084-5088. (LMB)

Bekers M., Upite D., Kaminska E., Laukevics J., Grube M., Vigants A., Linde R. (2005) Stability of levan produced by Zymomonas mobilis. PROCESS BIOCHEMISTRY, 2004  40,:1535-1539 (LBC)

Kalnenieks U., N. Galinina, M. M. Toma (2005) Physiological regulation of the properties of alcohol dehydrogenase II (ADH II) of Zymomonas mobilis: NADH renders ADH II resistant to cyanide and aeration. Archives of Microbiology 183: 450-455. (LMB)

Zarina D., Mutere O., Strikauska S., Dubova L., Berzins A. Survival of pathogenic agents in compost with added inoculum. Proc. of the 6th Int. Conf. Environ. Engineering, 2005, v.1, p.510-514. (LEM)

Andersone I., L.Auzina, A.Vigants, O. Mutere, P.Zikmanis (2004) Formation of levan from raffinose by levansucrase of Zymomonas mobilis. ENGINEERING IN LIFE SCIENCES, 4: 56-59. (GBC)

Toma M. M., U. Kalnenieks, A. Berzins, A. Vigants, M. Rikmanis, U. Viesturs (2003) The effect of mixing on glucose fermentation by Zymomonas mobilis continuous culture. Process Biochemistry 38: 1347-1350. (LMB)

Kalnenieks U., M. M. Toma, N. Galinina, R. K. Poole (2003) The paradoxical cyanide-stimulated respiration of Zymomonas mobilis: cyanide-sensitivity of alcohol dehydrogenase (ADH II). Microbiology 149: 1739-1744. (LMB)

Vigants A., SP.Marx,  R.Linde, S.Ore, , M.Bekers, I.Vina , H-G. Hicke  ( 2003 ) A novel and simple method for the purification of extracellular levansucrase from Zymomonas mobilis. CURRENT MICROBIOLOGY,  47: 198-202 (LBC)

Bekers M., Upite D, Kaminska E, Laukevics J, Ionina R, Vigants A (2003)    Catalytic activity of Zymomonas mobilis extracellular "levan-levansucrase" complex in sucrose medium.COMMUN. AGRIC. APPL. BIOL. SCI.   68(2 Pt A):321-324. (LBC)

Toma M.M., U.Kalnenieks, A.Berzins, A.Vigants, M.Rikmanis, U.Viesturs. (2003)  The effect of mixing on glucose fermentation by Zymomonas mobilis continuous culture. PROCESS BIOCHEMISTRY 38: 1347-1350. (LBC)

Kalnenieks U., N. Galinina, M. M. Toma, U. Marjutina (2002) Ethanol cycle in an ethanologenic bacterium. FEBS Letters 522: 6-8. (LMB)

Muter O., I.Lubinya, D.Millers, L.Grigorjeva, E.Ventinya, A.Rapoport. Cr (VI) sorption by intact and dehydrated Candida utilis cells in the presence of other metals.- Process Biochemistry, 2002, vol. 38, No. 1, p. 123-131. (LCB)

Muter O., A.Patmalnieks, A.Rapoport. Interrelations of the yeast Candida utilis and  Cr (VI): metal reduction and its distribution in the cell and medium.- Process Biochemistry, 2001, vol. 36, No. 10, p. 963-970. (LCB)

Bekers M., Marauska M., Laukevics J., Grube M., Vigants A., Karklina D., Skudra L., Viesturs U. (2001) Oats and fat-free milk based functional food. Food Biotechnology, 15, 1-12. (LBC)

Vigants A, Hicke HG, Marx SP. (2001) A simple and efficient method for the purification of membrane-bound levansucrase from Zymomonas mobilis. Curr Microbiol. 42, 415-418 (LBC)

Khroustalyova G.M., L.Adler, A.I.Rapoport. Exponential growth phase cells of the osmotolerant yeast Debaryomyces hansenii are extremely resistant to dehydration stress.- Process Biochemistry, 2001, vol. 36, No. 12, p. 1163-1166. (LCB)

Muter O., D.Millers, L.Grigorjeva, E.Ventina, A.Rapoport. Cr (VI) sorption by intact and dehydrated Candida utilis cells: differences in mechanisms.- Process Biochemistry, 2001, Vol. 37, No. 5, p. 505-511. (LCB)

Muter O., M.Grube, A.Rapoport. Effect of growth conditions to the Cr (VI) sorption by intact and dehydrated Candida utilis.- In  : Future trends in food and nutrition development. Elgava, 2001, p. 177-186. (LCB)

Kalnenieks U., N. Galinina, M.M. Toma, R. K. Poole (2000) Cyanide inhibits respiration, yet stimulates aerobic growth of Zymomonas mobilis. Microbiology 146: 1259-1266. (LMB)

Beker M., A.Rapoport, U.Viesturs. Country Profile: Latvia. In: Biotechnology in the Developing World and Countries in Economic Transition (ed. G.T.Tzotzos, K.G.Skryabin). CABI Publishing, 2000, p. 106-108 (LCB)

Bekers M., A.Vigants, J.Laukevics, M.Toma, A.Rapoport, P.Zikmanis. The effect of osmo-induced stress on product formation by Zymomonas mobilis on sucrose.- International Journal of Food Microbiology, 2000, vol. 55, No. 1-3, p. 147-150. (LCB)

Bekers M., Vigants A., Laukevics J.,Toma M,.Rapoports A,.Zikmanis P (2000) The effect of osmoinduced stress on product formation by Zymomonas mobilis on sucrose. International Journal of Food Microbiology. 55 , 147-150. (LBC)

Bekers M., E.Ventina, A.Karsakevich, I.Vina, A.Rapoport, D.Upite, E.Kaminska, R.Linde. Attachment of yeast to the modified stainless steel wire spheres, growth of cells and ethanol production.- Process Biochemistry, 2000, vol. 35, No. 5, p. 523-530. (LCB)

Beker M., A.Rapoport, U.Viesturs. Country Profile: Latvia. In: Biotechnology in the Developing World and Countries in Economic Transition (ed. G.T.Tzotzos, K.G.Skryabin). CABI Publishing, 2000, p. 106-108 (LCB)

Bekers M., E.Ventina, A.Karsakevich, I.Vina, A.Rapoport, D.Upite, E.Kaminska, R.Linde. Attachment of yeast to the modified stainless steel wire spheres, growth of cells and ethanol production.- Process Biochemistry, 2000, vol. 35, No. 5, p.523-530. (LCB)

Bekers M., A.Vigants, J.Laukevics, M.Toma, A.Rapoport, P.Zikmanis. The effect of osmo-induced stress on product formation by Zymomonas mobilis on sucrose.- International Journal of Food Microbiology, 2000, vol. 55, No. 1-3, p. 147-150. (LCB)

Bekers M., E.Ventina, A.Karsakevich, I.Vina, A.Rapoport, D.Upite, E.Kaminska, R.Linde. Attachment of yeast to the modified stainless steel wire spheres, growth of cells and ethanol production.- Process Biochemistry, 2000, vol. 35, No. 5, p.523-530. (LCB)

Poole R. K. and U. Kalnenieks (2000) Introduction to light absorption: visible and ultraviolet spectra. In: Spectrophotometry & Spectrofluorimetry. A Practical Approach (ed. Michael G. Gore). Oxford University Press, Oxford, pp. 1-32 (368 pages). (LMB)

Kalnenieks U., N. Galinina, S. Bringer-Meyer, R. K. Poole (1998) Membrane D-lactate oxidase in Zymomonas mobilis: evidence for a branched respiratory chain. FEMS Microbiol. Lett. 168: 91-97. 
(LMB)

Rapoport A.I., G.M.Khroustalyova, E.N.Kuklina. Anhydrobiosis in yeast: activation effect.- Brazilian Journal of Medical and Biological Research, 1997, vol. 30, No. 1, p. 9-13. (LCB)

Krallish I., H.Jeppsson, A.Rapoport, B.Hahn-Hagerdal. Effect of xylitol and trehalose on dry resistance of yeasts.- Appl. Microbiol. Biotechnol, 1997, vol. 47, p. 447-451. (LCB)

Rapoport, A.I. G.M.Khroustalyova, G.J.Camanis, M.J.Beker. Yeast anhydrobiosis: permeability of the plasma membrane.- Microbiology, 1995, vol. 64, No. 2, p. 229-232 . (LCB)

Rapoport A., O.Muter. Biosorption of hexavalent chromium by yeasts.- Process Biochemistry, 1995, vol. 30, No. 2, p.145-149. (LCB)